Bakery-style tall Pumpkin Chocolate Chip Muffins that are easy to make, moist, fluffy, and loaded with melty chocolate chips. Made easily with canned pumpkin puree, these are the perfect fall breakfast with just 10 minutes of prep!
If you are looking for more pumpkin breakfast recipes, then try the pumpkin almond croissants or the almond flour pumpkin pancakes recipe next!

A Quick Look at the Recipe
✅ Recipe Name: Pumpkin muffins
🕒 Ready In: ~35 minutes
👪 Makes: 12 muffins
🧑🍳 Main Ingredients: Flour, pumpkin puree, egg, chocolate chips, sugar, spices and oil
📌 Difficulty: Quick and easy baking recipe
Why you’ll love these pumpkin muffins with chocolate chips?

These pumpkin muffins are perfect in every way—even when it comes to making them! They’re super easy to make, and the earthy, mildly sweet flavor of real pumpkin purée pairs beautifully with the rich, dark decadence of chocolate chips. The pumpkin adds moisture and warmth, while the chocolate brings contrast and indulgence.
I modified my pumpkin cream cheese cake recipe by incorporating ½ teaspoon of baking powder for extra lift and then stirring in semi-sweet chocolate chips. It is an easy recipe for pumpkin muffins that is perfect bakery-style!
- maria doss
Jump to:
- A Quick Look at the Recipe
- Why you’ll love these pumpkin muffins with chocolate chips?
- Why Pumpkin Makes Muffins So Moist
- Pumpkin Muffins vs Pumpkin Cupcakes
- Pumpkin Chocolate Chip Muffin Baking Tips
- More sweet pumpkin recipes to try
- Pumpkin Chocolate Chip Muffins
- How to make?
- More Pumpkin Breakfast Recipes
Why Pumpkin Makes Muffins So Moist
Pumpkin purée is the secret behind incredibly moist, tender muffins. Since pumpkin is naturally high in water, it adds plenty of moisture to the batter and helps retain it as the muffins bake. Instead of drying out in the oven, the pumpkin helps keep the crumb soft and plush for days.
Pumpkin also contains natural fibers that help create a rich, smooth texture similar to adding extra fat. These fibers help prevent the flour from developing too much gluten, which would otherwise make the muffins tough or chewy. The result is a muffin that's soft, fluffy, and perfectly moist without feeling heavy.
Pumpkin Muffins vs Pumpkin Cupcakes
While pumpkin muffins and pumpkin cupcakes share many of the same cozy fall flavors, they’re made with different textures and occasions in mind. Pumpkin muffins are slightly heartier, less sweet, and perfect for breakfast, snacks, or lunchboxes. Pumpkin cupcakes are lighter and more dessert-like, usually finished with a generous swirl of frosting.
The main difference is in the batter and texture. Muffins use a simpler mixing method where the ingredients are combined just until incorporated, creating a soft but sturdier crumb. Since pumpkin adds a lot of moisture, the batter needs the right balance of flour and fat to prevent the muffins from becoming too dense. In this recipe, the extra structure helps support plenty of melty chocolate chips while keeping every bite moist and fluffy.
Chocolate and pumpkin are one of those flavor combinations that just work. Pumpkin brings a mild sweetness, earthy flavor, and plenty of moisture, while chocolate adds richness, depth, and a slightly bitter note that balances the sweetness. Together, they create a perfect contrast—cozy, indulgent, and full of fall flavor.
The pairing works visually too. The deep brown chocolate chips against the golden orange pumpkin crumb make these muffins as beautiful as they are delicious. Warm spices like cinnamon, nutmeg, and cloves naturally complement the roasted notes of cocoa, bringing all the flavors together.
One thing to keep in mind is that chocolate chips can sometimes sink in pumpkin muffins because pumpkin batter is naturally wetter and heavier than a regular muffin batter. I adjust the flour slightly to create the right balance of moisture and structure, helping the chocolate chips stay evenly distributed while keeping the muffins soft and fluffy.
Pumpkin Chocolate Chip Muffin Baking Tips
- Pumpkin puree - This pumpkin muffin recipe calls for 1 cup of canned pumpkin purée—make sure to use 100% pure pumpkin and not pumpkin pie filling, which contains added sugar and spices. I usually go with Libby’s, as it's thick and flavorful.
- Spice - Use 2 teaspoons of pumpkin pie spice instead of the cinnamon, to make pumpkin spice chocolate chip muffins.
- Mixing – Add the chocolate chips when the flour is halfway mixed—this helps avoid overmixing and keeps the muffins tender.
- Filling – Don’t be shy about filling the muffin cups to the top—a generous scoop of batter is the secret to those beautifully domed bakery style muffin tops.
- Storage - These pumpkin muffins are especially amazing when served warm, with the chocolate chips partially melted and ooey-gooey for the ultimate Fall indulgence. However, it can be stored at room temperature for up to 2 to 3 days or frozen for up to 2 months.
- Different type of oil - If you’d like to substitute the vegetable oil, coconut oil or olive oil are great options. Olive oil adds a subtle flavor that pairs nicely with pumpkin and chocolate, while coconut oil brings a light coconut taste that’s equally delicious.
- Skip the chocolate chips - You can leave out the chocolate chips for a plain pumpkin muffin. Just note that you might end up with about 10 muffins instead of 12, since there’s slightly less volume.
More sweet pumpkin recipes to try
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Pumpkin Chocolate Chip Muffins
Ingredients
- 1 ¾ cup all purpose flour
- 2 teaspoons ground cinnamon
- 1 teaspoon baking soda
- ½ teaspoon baking powder
- ½ teaspoon salt
- 2 large eggs preferably at room temperature
- ½ cup vegetable oil
- 1 cup sugar
- 2 tablespoons water
- 1 teaspoon vanilla extract
- 1 cup pumpkin puree
- ¾ cup semi sweet chocolate chips plus more for topping
Instructions
- Prep. Pre heat oven to 350°F and line a standard muffin pan with 12 paper liners.
- Mix dry ingredients. Whisk flour, cinnamon, baking soda, baking powder and salt together in a bowl and set aside.
- Mix wet ingredients. Add the eggs, sugar, oil, water and vanilla extract into a large bowl and whisk for about 1 minute, or until the sugar is dissolved. Whisk in the pumpkin puree.
- Finish batter. Mix in the combined flour mixture and chocolate chips, until just combined. Be careful not to overmix. Divide the batter into the prepared muffin pan, place more chocolate chips on top.
- Bake. Bake for about 26 to 29 minutes or a tooth pick inserted in the middle of a muffin comes clean. Place pan on a wire rack to cool.
Notes
Nutrition
Nutritional information, based on third-party calculations, should be seen as estimates, not guarantees, as various factors like product types, brands, processing methods, and more can alter the nutritional content in recipes.
How to make?
You can find full printable recipe for pumpkin spice muffins below, but here is a quick overview of the procedure along with step-by-step photos.







Step 7 - Divide batter evenly into a paper lined muffin pan, top with more chocolate chips and bake at 350 degrees.


🎃 A standard 15-ounce can contains about 1¾ cups of purée, so you'll have some left over. Don’t let it go to waste—use the extra to make a quick pumpkin mug cake or my best ever pumpkin cupcakes with cream cheese frosting!

More Pumpkin Breakfast Recipes
- Fluffy pumpkin waffles are soft and light with a pillowy texture. It captures Fall flavors with cozy cinnamon and plenty of pumpkin, and tastes amazing!
- Transform your day-old croissants into a fall sensation! These irresistible pumpkin almond croissants infuse buttery, flaky pastry with the rich flavors of honey, pumpkin and almond flour. Easy & scrumptious!
- Healthy Pumpkin Pancakes are made with almond flour! They turn out thick and fluffy and make a delicious Fall breakfast - Gluten-free, protein-rich, flourless, low carb with dairy-free option!
- Pumpkin Cream Cheese Cake has a soft and plush texture topped with the most decadent cream cheese swirl. It is an ideal fall brunch or dessert for a crowd.
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Hi, I’m Maria! I share easy, flavor-packed dinners, high-protein meals, and irresistible baking ideas. If you’ve ever asked, “Don’t know what to cook tonight?” you’re in the right place. And yes—there’s plenty here for breakfast, snacks, and dessert too. More about maria ->










Kelly @ Kelly Lynns Sweets and Treats
Great minds think alike!! Between your pumpkin pie wontons and my sweet potato pie wontons, we got pies covered for the holidays hehehehe. Looks so yummy!!!
Abby Hein
Did a half cup regular sugar and a half cup brown sugar and subbed the oil for 1/4th cup Greek yogurt. Turned out so yummy!!!
Maria Doss
That’s so great to hear, so glad you loved it - Maria ♡